Variant Gene Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs10497655
rs10497655
0.010 GeneticVariation BEFREE This result indicates that the rs10497655 allelic expression difference of ZNF804A during the critical period of brain development may have an effect on postnatal phenotypes of ASD. 30670685

2019

dbSNP: rs34714481
rs34714481
0.010 GeneticVariation BEFREE We analyzed the relationship of two polymorphisms (rs10497655 and rs34714481) in ZNF804A promoter region with ASD in 854 cases versus 926 controls. 30670685

2019

dbSNP: rs6735330
rs6735330
0.010 GeneticVariation BEFREE In XPO1, rs6735330 was associated with autism in all four cohorts (P<0.05), being significant in ASD-CARC cohorts (P-value following false discovery rate correction for multiple testing (P(FDR))=1.29 × 10(-5)), the AGRE cohort (P(FDR)=0.0011) and the combined families (P(FDR)=2.34 × 10(-9)). 21750575

2011

dbSNP: rs2535443
rs2535443
XG
0.010 GeneticVariation BEFREE We evaluated the male-specific genetic effects of ASD in 374 multiplex families of European ancestry in which all affected were male (male-only; MO) and identified a novel genome-wide significant association in the pseudoautosomal boundary on chromosome Xp22.33/Yp11.31 in the MO families of predominantly paternal origin (rs2535443, p = 3.8 × 10(-8) ). 24132906

2013

dbSNP: rs2896218
rs2896218
0.010 GeneticVariation BEFREE A haplotype of WNT2 (rs2896218-rs6950765: G-G) is significantly associated with ASDs in our trios samples, this finding warrants further validation by different sample and confirmation by functional study. 21575668

2011

dbSNP: rs6950765
rs6950765
0.010 GeneticVariation BEFREE A haplotype of WNT2 (rs2896218-rs6950765: G-G) is significantly associated with ASDs in our trios samples, this finding warrants further validation by different sample and confirmation by functional study. 21575668

2011

dbSNP: rs1033810883
rs1033810883
0.010 GeneticVariation BEFREE We also found a missense variant in WNT1 (S88R) that was overrepresented in the ASD sample (8 A/T in 267 ASD (minor allele frequency (MAF)=1.69%) vs 1 A/T in 377 controls (MAF=0.13%), OR=13.0, Fisher's exact test, P=0.0048; OR=8.2 and P=0.053 after correction for population stratification). 24002087

2013

dbSNP: rs61758378
rs61758378
0.010 GeneticVariation BEFREE We also found a missense variant in WNT1 (S88R) that was overrepresented in the ASD sample (8 A/T in 267 ASD (minor allele frequency (MAF)=1.69%) vs 1 A/T in 377 controls (MAF=0.13%), OR=13.0, Fisher's exact test, P=0.0048; OR=8.2 and P=0.053 after correction for population stratification). 24002087

2013

dbSNP: rs1544410
rs1544410
VDR
0.010 GeneticVariation BEFREE This case-control study aimed to determine the association of single-nucleotide polymorphisms (SNPs) rs731276 (TaqI), rs1568820 (Cdx2), rs1544410 (BsmI), and rs2228570 (FokI) in the vitamin D receptor (VDR) gene with susceptibility of childhood ASD and severity of the disease. 29581796

2018

dbSNP: rs2228570
rs2228570
VDR
0.010 GeneticVariation BEFREE This case-control study aimed to determine the association of single-nucleotide polymorphisms (SNPs) rs731276 (TaqI), rs1568820 (Cdx2), rs1544410 (BsmI), and rs2228570 (FokI) in the vitamin D receptor (VDR) gene with susceptibility of childhood ASD and severity of the disease. 29581796

2018

dbSNP: rs1565532385
rs1565532385
C 0.700 GeneticVariation CLINVAR

dbSNP: rs1567533189
rs1567533189
G 0.700 CausalMutation CLINVAR Targeted resequencing of 358 candidate genes for autism spectrum disorder in a Chinese cohort reveals diagnostic potential and genotype-phenotype correlations. 30763456

2019

dbSNP: rs796053483
rs796053483
G 0.700 GeneticVariation CLINVAR Targeted resequencing of 358 candidate genes for autism spectrum disorder in a Chinese cohort reveals diagnostic potential and genotype-phenotype correlations. 30763456

2019

dbSNP: rs139896303
rs139896303
0.010 GeneticVariation BEFREE We conducted a detailed association analysis between the tryptophan hydroxylase 2 gene and autism spectrum disorders in a Japanese population using 19 markers, including tagging single nucleotide polymorphisms and a novel missense variation, p.R225Q, identified through exon resequencing. 22361444

2012

dbSNP: rs1843809
rs1843809
0.010 GeneticVariation BEFREE A total of 110 adult patients with ASD (n=61) or ADHD (n=49) with or without a lifetime history of SUD participated in a study in which we genotyped polymorphisms in five known candidate genes for (one of) the disorders, i.e. the 5HTTLPR in SLC6A4/5-HTT, rs1800497 (TaqIA C>T) in DRD2, rs7794745 in CNTNAP2, rs1843809 in TPH2, and rs6565113 in CDH13. 20446882

2010

dbSNP: rs2129575
rs2129575
0.010 GeneticVariation BEFREE We found a significant association at the rs2129575 with ASD susceptibility (corrected p=0.006). 22698779

2012

dbSNP: rs886039770
rs886039770
A 0.700 GeneticVariation CLINVAR

dbSNP: rs1800692
rs1800692
0.010 GeneticVariation BEFREE T-C polymorphism (rs1800692) was the only variation in the intron 4 of TNFRSF1A gene that we observed at the ASD patients. 23269568

2013

dbSNP: rs1229030855
rs1229030855
0.010 GeneticVariation BEFREE Six missense changes were detected only in individuals with ASD with sleep disturbance: p.F498S in TIMELESS, p.S20R in NR1D1, p.R493C in PER3, p.H542R in CLOCK, p.L473S in ARNTL2, and p.A325V in MTNR1B. 25957987

2016

dbSNP: rs12037377
rs12037377
0.010 GeneticVariation BEFREE We identified a rare homozygous c.790C>T (His264Tyr) variation in TFB2M gene in two Korean siblings with ASD by whole-exome sequencing. 30414672

2018

dbSNP: rs1801198
rs1801198
0.020 GeneticVariation BEFREE ASD probands showed a higher frequency of rs2298444 'A' allele (P = 0.01) and genotypes with 'A' allele (P = 0.03) when compared with the controls. rs1801198 'C' allele and 'CG' genotype also showed higher occurrence in the probands (P = 0.009 and 0.005, respectively). 30676283

2019

dbSNP: rs1801198
rs1801198
0.020 GeneticVariation BEFREE MATERIAL AND METHODS Genotypes of transcobalamin 2 (TCN2) rs1801198, methionine synthase (MTR) rs1805087, methionine synthase reductase (MTRR) rs1801394, and methylene tetrahydrofolate reductase (MTHFR) rs1801133 were examined in 201 children with ASD and 200 healthy controls from the Han Chinese population. 29348398

2018

dbSNP: rs141441277
rs141441277
0.010 GeneticVariation BEFREE We describe a 7-year-old male with high functioning autism spectrum disorder (ASD) and maternally-inherited rare missense variant of Synaptotagmin-like protein 4 (<i>SYTL4)</i> gene (Xq22.1; c.835C>T; p.Arg279Cys) and an unknown missense variant of Transmembrane protein 187 (<i>TMEM187</i>) gene (Xq28; c.708G>T; p. Gln236His). 31323913

2019

dbSNP: rs193024911
rs193024911
0.010 GeneticVariation BEFREE In this study, we show that nonsense (A94fs199X) and missense (Y236S and G464R) mutations in SYN2 are associated with ASD in humans.The phenotype is apparent in males. 23956174

2014

dbSNP: rs762457833
rs762457833
0.010 GeneticVariation BEFREE In this study, we show that nonsense (A94fs199X) and missense (Y236S and G464R) mutations in SYN2 are associated with ASD in humans.The phenotype is apparent in males. 23956174

2014